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View Structure Prediction Details

Protein: dkf-2
Organism: Caenorhabditis elegans
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dkf-2.

Description E-value Query
Range
Subject
Range
gi|157765766 - gi|157765766|ref|XP_001675226.1| Hypothetical protein CBG17106 [Caenorhabditis briggsae AF16]
gi|39580607, gi|... - gi|39580607|emb|CAE70503.1| Hypothetical protein CBG17106 [Caenorhabditis briggsae], gi|187025991|em...
295.0 [0..1] [214..1]
CE18967 - WBGene00012019 Phorbol esters\/diacylglycerol binding domain (C1 domain) (2 domains), serine\/threon...
107.0 [0..166] [216..701]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNILRLPH ADEPTTSQSV QDYPLVHFSP RRHQKFRTII SVGDSDVIKD SSLTDEELYN  60
   61 IIHASPIARK SSTVSSTDSG YLGSSGASSS CVRSREGSTV SSTITVERTR RGGSTASSEP 120
  121 DSVADSEGAG SYSSFSSIAS TASRMLGRAA DCLVLMTKRN GWSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAGSPSDEKG SSLDAQSWTT AIQSALMPVT PQSSVVGGKR IDKLKVPTEG KTRPPY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.342 N/A N/A a.159.2 FF domain
View Download 0.299 N/A N/A a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.281 N/A N/A a.4.1 Homeodomain-like
View Download 0.281 N/A N/A a.4.1 Homeodomain-like
View Download 0.272 N/A N/A a.60.2 RuvA domain 2-like
View Download 0.256 N/A N/A a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain
View Download 0.251 N/A N/A d.58.17 Metal-binding domain
View Download 0.251 N/A N/A d.58.17 Metal-binding domain
View Download 0.241 N/A N/A a.108.1 Ribosomal protein L7/12, oligomerisation (N-terminal) domain


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