| Protein: | nhr-130 |
| Organism: | Caenorhabditis elegans |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-130.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..3] | [437..30] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MQIATSSTSP SIFYTPSISP MEEDMNCQEL VVNLYTCQVC ALPAHGNHFG AISCRACAAF 60
61 FRRACTGTKT TYKCKKQNNC DIWENGRYKC KKCRLDRCNE VGM
|
| Detection Method: |  |
| Confidence: | 21.30103 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [104-440] |
1 11 21 31 41 51
| | | | | |
1 DPGRFQFDRD LISATEKYPN SKNFRRTFGM SRLPETIEHF LGRPHFIIFL ERHIYSHSEK 60
61 NFVDLQHLIA KASKLLELGS EKPLIARNNL EKLALGLNLV RDQPAGSHDV QLVTKLGKDE 120
121 ALTFWETDFL TVAKWLTYFD DFQLLPHNQQ ILLLKSVWHV WNRLEKLALT ATSRRQNVCE 180
181 QKQLMLTYNS VCNPKTIELD YSWFTKYPKE QLCFFFDEME DYMLTSALDP LTSLEPTDIE 240
241 LTYMLCQLCF HYAGKRYGGE ILEVTEKFQE NLADNLHDYY VNELNMPRYC GRLNQMLKIN 300
301 NLIQQDIWEK RAKHELAKVF DIFCIEFSHP EMFEDTG
|
| Detection Method: | |
| Confidence: | 29.154902 |
| Match: | 1z5xE |
| Description: | hemipteran ecdysone receptor ligand-binding domain complexed with ponasterone A |
Matching Structure (courtesy of the PDB): |
|
