YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: inx-15
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-15.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
389.0 [0..5] [380..6]

Back

Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFVVNLVTQ YTVQRHEDDF IDRLNFQYSA YVFALSALVI GYHTYFGRAI SCWTPAEFKG  60
   61 GWNEYTTDYC LIENTYYVPL EDPNMPPERY REEKELS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQWVQFILV FLAFLFYLPY LYWSTVNWWS GLQVKAVVDV ACNLDKTDVG KRNAGIEKIA  60
   61 SHLKKYIDRQ GRKSPIPLIP NII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [181-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRNWVSFNYI LTKFLFLVNL IAQMFLIHFF LGFDLDDFIS LRVGFGSNWI ANGIFPRQTM  60
   61 CDFEIRKKGS IQKYSVQCVL SMNMLNEKVF LALFYWIIAL FFLTVWNLFT SFQHFFHASS 120
  121 RKEFVRRMLS AGGHTLTDGG HGEEKVPLVE RPDGTYSNDY NRVLSINPDI VVVLHLIAKN 180
  181 AGDNVCQNVV DMLFQKLSEK SQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle