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View Structure Prediction Details

Protein: inx-15
Organism: Caenorhabditis elegans
Length: 382 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-15.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
389.0 [0..5] [380..6]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFVVNLVTQ YTVQRHEDDF IDRLNFQYSA YVFALSALVI GYHTYFGRAI SCWTPAEFKG  60
   61 GWNEYTTDYC LIENTYYVPL EDPNMPPERY REEKELS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YYQWVQFILV FLAFLFYLPY LYWSTVNWWS GLQVKAVVDV ACNLDKTDVG KRNAGIEKIA  60
   61 SHLKKYIDRQ GRKSPIPLIP NII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [181-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRNWVSFNYI LTKFLFLVNL IAQMFLIHFF LGFDLDDFIS LRVGFGSNWI ANGIFPRQTM  60
   61 CDFEIRKKGS IQKYSVQCVL SMNMLNEKVF LALFYWIIAL FFLTVWNLFT SFQHFFHASS 120
  121 RKEFVRRMLS AGGHTLTDGG HGEEKVPLVE RPDGTYSNDY NRVLSINPDI VVVLHLIAKN 180
  181 AGDNVCQNVV DMLFQKLSEK SQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle