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View Structure Prediction Details

Protein: inx-17
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-17.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
395.0 [0..8] [360..9]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIDTGFYSK TITPTYDSDA IDRLRYYFTV FLLTSSAFFI MAKQYVGQSI QCWAPKQFKG  60
   61 GWEEYAESYC LIENTYYVHM NNSNLPGPAI RENKELKYYQ WVPFILFGLA VVIYIPRVIW 120
  121 NAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSLIGINISI VTSNLRKVAK SGFTSENPDI EKKKKEMQCK KKATSRQVDG EFWGSRLTTC  60
   61 ILATKFLATI LIFISMGFLD YF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [206-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGPMYGWT ITKDILQGRQ WQESGSFPRV TFCDFQVREL GYVNNWSLQC VLMVNMFNEK  60
   61 LFIALWWWYA LLAILSIFDI FRVLFRFTIH HQISFITRIL ACTGDSAISA TEVGEFNRKV 120
  121 LRIDGINLTH LVYANATIFE AADFVRPMWE QFKENQN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle