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View Structure Prediction Details

Protein: inx-17
Organism: Caenorhabditis elegans
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-17.

Description E-value Query
Range
Subject
Range
inx-1 - status:Confirmed UniProt:Q17394 protein_id:AAN71842.1
395.0 [0..8] [360..9]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIDTGFYSK TITPTYDSDA IDRLRYYFTV FLLTSSAFFI MAKQYVGQSI QCWAPKQFKG  60
   61 GWEEYAESYC LIENTYYVHM NNSNLPGPAI RENKELKYYQ WVPFILFGLA VVIYIPRVIW 120
  121 NAL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSLIGINISI VTSNLRKVAK SGFTSENPDI EKKKKEMQCK KKATSRQVDG EFWGSRLTTC  60
   61 ILATKFLATI LIFISMGFLD YF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [206-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGPMYGWT ITKDILQGRQ WQESGSFPRV TFCDFQVREL GYVNNWSLQC VLMVNMFNEK  60
   61 LFIALWWWYA LLAILSIFDI FRVLFRFTIH HQISFITRIL ACTGDSAISA TEVGEFNRKV 120
  121 LRIDGINLTH LVYANATIFE AADFVRPMWE QFKENQN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle