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View Structure Prediction Details

Protein: CE18098
Organism: Caenorhabditis elegans
Length: 782 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE18098.

Description E-value Query
Range
Subject
Range
gi|73996936, gi|... - gi|73996936|ref|XP_543753.2| PREDICTED: similar to Protein C12orf11 (Sarcoma antigen NY-SAR-95) isof...
1029.0 [0..1] [744..3]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQRDMKTVF LLDRSAKFVE NCNETFDVTI REGPKQKKLQ FEKTIWTWCL EGIFEMHRIL  60
   61 SDVYPRGTLQ LRFALADFMG KMLDTQWTDG FLTREELGEL IETVSRPSEA NTDITPIGGL 120
  121 TMAIEALAVQ SPEQRNYNYD VRYSANKRTA QNSEVIRVTR ELRGLPPLPT VQNAGNLIMY 180
  181 TRLNTQEEME QLQTEIVELV VSRNKIADAP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [211-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNKTFCPITS LRLFIVNYYA TGDECTVKTH SLQAHPDLPL LKIWVISRKA ADMCDAIHSL  60
   61 LVDAFDLGST TVTKIPMKED NRGSSNYDVE LFHSGKVHAM LKENNLIDTV SKKGDSDKGV 120
  121 TYDTMRLTWT TAPKTKWSLF PYHGAAVPCT TAQAYSRPSA CLTQFVRDGR CVMLDSEKTT 180
  181 ELGMNMHEKL VSHLLIANRG RIFIQEIDFM QKKADRIAGK LKR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [434-551]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRVLHAPEDP INMNQLRHTY KQLELRFVAK NRMDDNLTEK ETEKWTGLKN SDLKKRFQRI  60
   61 SKNIPCFAAD TFIFNEKVTP KLEPLISLIT KTTLSENDVD KCKQCIVTLY QMKNERQY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [552-614]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VISPESDIKI SSVRNLKDPD EQLRVTFVEL AKHIMKYVTF SEKHKEIYKT YMTTLNVDKL  60
   61 LEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [615-782]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLDDDEAVDK MFVKFSFFGK SDTASKTDED EDSSDDEDEE ILKSPALKKL FGYVDARDER  60
   61 KYEELYGQGF KKKKPEVEEK PIVMAKEIKV DIFSNMCDML EVKESKIRRE FVGRETHGNI 120
  121 APLYPQLAEK LERPASPAAT ERGTERVRNT AERGGSGTPP PGGRRNFQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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