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View Structure Prediction Details

Protein: CE17636
Organism: Caenorhabditis elegans
Length: 662 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17636.

Description E-value Query
Range
Subject
Range
gi|66063, gi|206... - gi|93279231|pdb|2DDH|A Chain A, Crystal Structure Of Acyl-Coa Oxidase Complexed With 3-Oh- Dodecanoa...
548.0 [0..12] [659..2]

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Predicted Domain #1
Region A:
Residues: [1-662]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLNTSICEV DNPDLTEERE KGTFDTDKMA AVIYGSEKLA RRRREISEAV SKIPELADTQ  60
   61 PFPFMDRLEK ITEGSRKLEV LNNNIRDIID YDDNGERLHI YQEVTGMEGH PLALHEVMFI 120
  121 PALVSQASKE QQEKWLGRAR RREIIGCYAQ TEMGHGTNLR KLETTATYFP DTQEFVLNTP 180
  181 TTTALKWWPG ALGKSSNYAV VVVDMIIKGK SYGPHPFMVQ LRDEKTHIPL KGIVVGDIGP 240
  241 KMSFNGGDNG FLGFDKFRVP RTNLLMRHVR VEADGTYVKP PHAKVNHSAM VHVRSHMATG 300
  301 QGALLAQALI IAVRYSAVRR QGFLENKTQE VKVLDYQTQQ HRLFPSLARA YAFIFTGFET 360
  361 IHLYSQLLKD VDMGNTSGMA DLHALTSGLK SVVTHQTGEG IEQARMACGG HGYSMASYIS 420
  421 EIYGIAIGGC TYEGENMVML LQLARYLVKS VELIKSGEAK KLGPMVSYLA AKGGHPDLSS 480
  481 LNGYVTAFEH MARRQAWKAT EKFLKLMESG ESREIAWNKS TVELTRASRL HTRLFIIEAF 540
  541 MRRVSRIEDI PVKEVLTDLL HLHVNYELLD VATYALEFMS STQLDYIRDQ LYLYLEKIRP 600
  601 SAVSLVDSFQ ISDMQLRSVL GRRDGNVYEN LFKWAKSSPL NKSDVLPSVD KYLMPMMEKA 660
  661 KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
binding 0.749242681954192 bayes_pls_golite062009
protein binding 0.269787458920778 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle