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View Structure Prediction Details

Protein: CE17635
Organism: Caenorhabditis elegans
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17635.

Description E-value Query
Range
Subject
Range
gi|66063, gi|206... - gi|93279231|pdb|2DDH|A Chain A, Crystal Structure Of Acyl-Coa Oxidase Complexed With 3-Oh- Dodecanoa...
547.0 [0..9] [657..2]

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Predicted Domain #1
Region A:
Residues: [1-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSICKGDNS DLTEERKNAT FDTDKMAAVI YGREEIASRR RQLTESISRI HELAESKPLV  60
   61 FMTREEKIAE SCRKLEVLSR HWNQTPFNRD NEEDALHIYR EVLGMEGHPL ALHDTMFIPT 120
  121 LVAQASQEQQ EKWLGRARRK EIIGCYAQTE MGHGTNLRKL ETTATYSPDT QEFILNTPTI 180
  181 TALKWWPGAL GKSSNNAIVV ANLLIKDQNY GPHPFMVQLR DEKTHIPLKG IVVGDIGPKM 240
  241 AFNGADNGYL GFNNHRIPRT NLLMRHTKVE ANGTYIKPSH AKIGYSSMVK VRSRMAMDQG 300
  301 LFLASALVIA VRYSAVRRQG FLEDKTQKVK VLDYQTQQHR LFPSLARAYA FIFTGFETIH 360
  361 LYSQLLKDVD MGNTSGMADL HALTSGLKSV VTHQTGEGIE QARMACGEHG YSMASYISEI 420
  421 YGVAIGGCTY EGENMVMLLQ LARYLVKSVE LIKSGEEKKL GPMVSYLAAK GGHPDLSSLN 480
  481 GYVTAFEHMA RRQAWKATEK FLKLMETGES REVAWNKSAV ELTRASRLHT RLFIIEAFMR 540
  541 RVSRIEDIPV KEVLTDLLHL HVNYELLDVA TYALEFMSST QLDYIRDQLY LYLEKIRPSA 600
  601 VSLVDSFQIS DMQLRSVLGR RDGNVYENLF KWAKSSPLNK SDVLPSVDKY LKPMMEKAKL 660
  661 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 156.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle