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View Structure Prediction Details

Protein: CE17633
Organism: Caenorhabditis elegans
Length: 674 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE17633.

Description E-value Query
Range
Subject
Range
gi|66063, gi|206... - gi|93279231|pdb|2DDH|A Chain A, Crystal Structure Of Acyl-Coa Oxidase Complexed With 3-Oh- Dodecanoa...
576.0 [0..12] [668..1]

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Predicted Domain #1
Region A:
Residues: [1-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHLNKTIQE GDNPDLTAER LTATFDTHAM AAQIYGGEMR ARRRREITAK LAEIPELHDS  60
   61 MPLPYMTREE KIMESARKLT VLTQRMSEII DPTDAGELYH LNNEVLGIEG NPMALHGVMF 120
  121 IPALNAQASD EQQAKWLIRA LRREIIGTYA QTEMGHGTNL QNLETTATYD IGTQEFVLHT 180
  181 PKITALKWWP GNLGKSSNYA VVVAHMYIKG KNFGPHTFMV PLRDEKTHKP LPGITIGDIG 240
  241 PKMAYNIVDN GFLGFNNYRI PRTNLLMRHT KVEADGTYIK PPHAKINYSA MVHVRSYMLT 300
  301 GQAIMLSYAL NIATRYSAVR RQGQIDKNEP EVKVLEYQTQ QHRLFPFIAR AYAFQFAGAE 360
  361 TVKLYERVLK EMKSGNVSLM ADLHALTSGL KSVVTHQTGE GIEQARMACG GHGYSMASYI 420
  421 SEIYGVAIGG CTYEGENMVM LLQLARYLVK SAALVKSGKA SQLGPLVAYL GARSEPTSLI 480
  481 DRVPNGGITE YIKTFQHIAK RQTLKAANKF FGLMENGEKR EIAWNKSSVE LNRASRLHTR 540
  541 LFIVEAFARR VNEIGDITIK EALSDLLHLH VNYELLDVAT YALEDGFMSS TQLDYVRDQL 600
  601 YFYLQKIRPN AVSLLDSWEF SDRELRSVLG RRDGHVYENL FKWAKESPLN KTDVLPSVDT 660
  661 YLKPMMEKAR QSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 165.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle