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View Structure Prediction Details

Protein: gi|25396627
Organism: Caenorhabditis elegans
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25396627.

Description E-value Query
Range
Subject
Range
par-1 - serine\/threonine kinase (KIN1\/SNF1\/Nim1 subfamily) status:Confirmed UniProt:Q9TW45 protein_id:CAB...
160.0 [0..1] [136..1]
gi|66734180 - gi|66734180|gb|AAY53487.1| serine/threonine protein kinase par-1 [Caenorhabditis remanei]
53.0 [0..71] [138..5]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSASVGKKP EHVNTPPGDN QQKSSKENQK SNKDKQSSNQ PPGQIPHSTN SGTRKSSGSG  60
   61 LKTANLKHPA RPSTESSTSS SHHRRPAQEM NGTSTATATG GGGTSGATTT ASSGAPAASS 120
  121 GGSSARYSSS GRSHPTSGR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle