| Protein: | dyci-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 643 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dyci-1.
| Description | E-value | Query Range |
Subject Range |
|
|
483.0 | [0..16] | [643..1117] |
|
Region A: Residues: [1-194] |
1 11 21 31 41 51
| | | | | |
1 MSELRKLELE RKKQKLAELK SQRKREEDAR VQNLLRSTNE NGTTQNGTSR QTLSSNEVED 60
61 ILRQVGISTE PTVREESPAP PPGSHSDNHV DPSASHPRIS NLLSVDLEFS SVQTACTDNK 120
121 DSAIYSKGTQ TDDERISVGE FSLGSQEFDY DDDMIMPMDH GQFRGRAHSH DQDSPLPYNE 180
181 EIAKLLGQTK QGDK
|
| Detection Method: |  |
| Confidence: | 3.154902 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [195-643] |
1 11 21 31 41 51
| | | | | |
1 GLTRQETEEK KTQTVQIVPP LSDEEKYRLT LDPEFLDSFN RSCKVISRAL NEEIDICINY 60
61 TKDPYEKAIA SDDLLHLAQV YQDETWTAKR LVTGMAFSEH YPDLLAVSYG PCDIPNEPPG 120
121 VIVVWNTKSK RMTAEFIVYC QSEIQSVAFA RFHAHLLLAG CESGQICVWD NRLTSRKLPI 180
181 NRSPLTTQAH TYTVSCLAVV GTKNAHNFVS LSRDGRICSW NVDNLTQPVD GKELMTKEGK 240
241 AASATRMSFP IGEMQTFVVG TDTGEILAAS RNGADPAVIK TDVCYKGHSG TLTGIEFHRA 300
301 SGVVDFSHLF ISSSHDWTVK LWSTKDANLK FSFESHPDLV LDVAWSPVHP AVFASIDADG 360
361 NIFVWNLNED VEGPVARLRA GAEGESVYMN RLIWSPDGKH VFVGDDEGRV HMYDVRESLY 420
421 VLKSEEWNRF ARVLSDMKQS NEEAENYNM
|
| Detection Method: | |
| Confidence: | 71.045757 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytoskeletal protein binding | 3.1056443224755 | bayes_pls_golite062009 |
| tubulin binding | 2.76945430061825 | bayes_pls_golite062009 |
| microtubule binding | 2.72684103222924 | bayes_pls_golite062009 |
| actin binding | 2.27900251096697 | bayes_pls_golite062009 |
| binding | 1.8484919978091 | bayes_pls_golite062009 |
| dynein binding | 1.73730057055973 | bayes_pls_golite062009 |
| protein binding | 1.24173112731149 | bayes_pls_golite062009 |
| dynein heavy chain binding | 0.894931976836991 | bayes_pls_golite062009 |
| dynein intermediate chain binding | 0.707581908546932 | bayes_pls_golite062009 |
| transporter activity | 0.692270256454453 | bayes_pls_golite062009 |
| actin filament binding | 0.554537899540618 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.121183207943714 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.118975415284669 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00585398682921312 | bayes_pls_golite062009 |
