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View Structure Prediction Details

Protein: CE16635
Organism: Caenorhabditis elegans
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16635.

Description E-value Query
Range
Subject
Range
CE15562 - WBGene00007198 status:Predicted TR:O45229 protein_id:CAB05118.1
552.0 [0..1] [645..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFIFNDDLK RQMDFLIDST EHATERIKLC PLLKKFSERF GLNYSTYLSR FHQKLCPQIS  60
   61 NMDTYSVESR IRLLFALSGK VSDEFLARMQ SLGNVELYEN RRIEKFVSND ESLILEDN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.031517
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QYGQLNDEKC KKFMEFLMQH TKDFVKPMSA TQVFEEFKKR ENSSTHSSMY FERFRNELAP  60
   61 MIHLWNAYSV GARVRLMFVL SQSVENEFLT RIEQLGIVQL DDKKRIWKFT SFDEQLKLQG 120
  121 RHGRCSV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 59.508638
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIESPEFVRF VQFLVNKTEK SNEPIDQRRV FGEFRALEHG VLDVTTYRGR FHGVVARNMI  60
   61 LLDNLSIDLR IRMMFALSGK MEANFLSEVE KQGIVRLDDQ NRIIEYVAND GKMKLKGQHE 120
  121 GRKRAWKTRA TGANSGNTGS SGNYSK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.080922
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [392-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSRRDGEGCS SRQETPHMDT AGSFDDSFNF EEFTRMRLSY NDVLKSFATV IDRAPKVKIS  60
   61 DDTKGNVDKH KAQQIIDLLK TFTTVVESAP KLEIVDESEV QCDAVNNNKA QEADVEGS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [510-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYPKISMLNV LDKLDNMLIS LESELLNELL NEIEQLRVGP ADKMIPLKLF INAMESMLQN  60
   61 ITGKFQTKDA DGSTPAKDFL KTLTHFLKWM KVPLLASFLK KVEEEIEKLG DIEQNVMIGD 120
  121 VNQQVRDLLV FLVVSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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