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View Structure Prediction Details

Protein: CE16565
Organism: Caenorhabditis elegans
Length: 330 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16565.

Description E-value Query
Range
Subject
Range
gi|157775703 - gi|157775703|ref|XP_001665917.1| hypothetical protein CBG18323 [Caenorhabditis briggsae AF16]
gi|39591835, gi|... - gi|39591835|emb|CAE71413.1| Hypothetical protein CBG18323 [Caenorhabditis briggsae], gi|187025330|em...
199.0 [0..1] [330..1]

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Predicted Domain #1
Region A:
Residues: [1-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAGVRLLAY GRLAVRAVFS ASALDLGSTI GPEAISSGRR GLSSGSSKPK PSSEGSPSSP  60
   61 APSAHVENVI ASCAGFPKDM LNGPSTVLDK GVFGDDAWFI SRFKNTFVVG VADGVGGWRK 120
  121 YGIDPSAFSR RLMKECEKRV QKGDFDPQKP ESLLDYAFRA SAEAPRPVGS STACVLVVHQ 180
  181 EKLYSANLGD SGFMVVRNGK IVSKSREQVH YFNAPFQLTL PPEGYQGFIG DKADMADKDE 240
  241 MAVKKGDIIL LATDGVWDNL SEQQVLDQLK ALDAGKSNVQ EVCNALALTA RRLAFDSKHN 300
  301 SPFAMKAREH GFLAPGGKPD DITLVLLLIA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.0
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.29765002420868 bayes_pls_golite062009
phosphatase activity 6.46633224572308 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.25564034681743 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.66354576593165 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.48531346121898 bayes_pls_golite062009
hydrolase activity 4.10826723952347 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
binding 0.72471987194812 bayes_pls_golite062009
protein binding 0.562370538455306 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle