| Protein: | nph-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 682 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nph-1.
| Description | E-value | Query Range |
Subject Range |
|
|
562.0 | [0..36] | [677..3] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MSIFGSILSL QDAINRFPQF EYQINRLEKE QKDTEAASRA SFRKHFVRQC QELHRQLDDH 60
61 RNRIEKAKTD ETYKKENALE QLDKLKQRLT ALSPEKEQLS FSVSVDSQSE EEKPKMAAIG 120
121 RRKSTMYND
|
| Detection Method: |  |
| Confidence: | 17.522879 |
| Match: | 1zwwA |
| Description: | Crystal structure of endophilin-A1 BAR domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [130-456] |
1 11 21 31 41 51
| | | | | |
1 DESEDSDNDS EIIETDVQLD DPLPSQPQPP QQQHQQPQPK PRQPITITKP LESKTLNERQ 60
61 ELDEVISRLQ NPSRGDSGEV MEPVVVRGNV FVAIDSWDAE AEGDLELIKG KKYRITQTRS 120
121 DGWWTALDEY GQRGLVPKTY LQHVKEKPKN VPSKVSSRLG VRDSVIGIST TTDPSRREAN 180
181 RQASRVDDCL GKAYDNDTHL SLVCHMAPRL STSNIGFHDL FWSHYKDQVY KRTVHISKII 240
241 RLVRFEKMPL IEHKALVRMA LVDITNPKST QIVSNVHTLV PRVKSSTWYF EKKESQTRSC 300
301 IEFSDFVLRS NYRSPTVVLV VEASHLV
|
| Detection Method: | |
| Confidence: | 42.522879 |
| Match: | 2h8hA |
| Description: | No description for 2h8hA was found. |
|
Region A: Residues: [457-533] |
1 11 21 31 41 51
| | | | | |
1 KTQIGIEEKS LGHTYLRLII DDKAVPSRTN VLYLDDEVMT KMKLPEASKR RVLVQVMDVP 60
61 KDKVSYVDSL PDVIVFN
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1djgA |
| Description: | Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [534-682] |
1 11 21 31 41 51
| | | | | |
1 ALYLPFFHFY RRRAGTILIR DNRNPLSAEF ISDPLLSVFP FVCDQHDIMD IMLKIWKTKK 60
61 KVLAKKNEAE QTAEFFQTFL HTAFFIHGIR MISYDVKDDL TLSIRQQTMQ RFVDALNKGL 120
121 FKQFIADQQC KPINIIDYSL DLLGNHSID
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
