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View Structure Prediction Details

Protein: CE15832
Organism: Caenorhabditis elegans
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15832.

Description E-value Query
Range
Subject
Range
CE37016 - status:Partially_confirmed UniProt:O45527 protein_id:CAB07204.2
219.0 [0..41] [496..140]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFILLLLT IFVASLSADD PDVVSGGAVA GHPIRVFMRA GSRNKPLVAI GYKAAILSFL  60
   61 FLDPTRTNVF YYDSKGKNTL ITCENVHKSV LVEENDFVTV FFAELKDILL SETSIKIIYF 120
  121 FILDEYKYCS EDFYTPETEE EKIIQLETWK NATSACTNNH DFKEFYLHYK KNLKIF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDEERDELLG LENPMGKRFL ETSNGIFEII FSQKTQSLYI KRLPSSVEEF EIIQGTCEIV  60
   61 QEEHKCRLSN SNLPLQVFHN HLLMDQVLKN VGLASIQSLR KVSFGIRHAI DIAKPDSKIE 120
  121 TMKINLIVFE TVDVKLFARE EYSGKTIIYR PIEYQE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [333-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYMLDDVTET LNGTYKSAKK HGKCFVNSEY NTMDGNSLNL FATDMKINLG SQKSVIEELS  60
   61 VDVSHSEYVR DREFRNTKIF LGLFEESLKS LGRLLSVKEF SMQTGEQEEI LQILYLDPSV 120
  121 IEVIEIRRPS SLFNFTGLKI DEASLLNQWK NAKEIIIELT ISAY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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