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View Structure Prediction Details

Protein: CE15832
Organism: Caenorhabditis elegans
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15832.

Description E-value Query
Range
Subject
Range
CE37016 - status:Partially_confirmed UniProt:O45527 protein_id:CAB07204.2
219.0 [0..41] [496..140]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFFILLLLT IFVASLSADD PDVVSGGAVA GHPIRVFMRA GSRNKPLVAI GYKAAILSFL  60
   61 FLDPTRTNVF YYDSKGKNTL ITCENVHKSV LVEENDFVTV FFAELKDILL SETSIKIIYF 120
  121 FILDEYKYCS EDFYTPETEE EKIIQLETWK NATSACTNNH DFKEFYLHYK KNLKIF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDEERDELLG LENPMGKRFL ETSNGIFEII FSQKTQSLYI KRLPSSVEEF EIIQGTCEIV  60
   61 QEEHKCRLSN SNLPLQVFHN HLLMDQVLKN VGLASIQSLR KVSFGIRHAI DIAKPDSKIE 120
  121 TMKINLIVFE TVDVKLFARE EYSGKTIIYR PIEYQE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [333-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYMLDDVTET LNGTYKSAKK HGKCFVNSEY NTMDGNSLNL FATDMKINLG SQKSVIEELS  60
   61 VDVSHSEYVR DREFRNTKIF LGLFEESLKS LGRLLSVKEF SMQTGEQEEI LQILYLDPSV 120
  121 IEVIEIRRPS SLFNFTGLKI DEASLLNQWK NAKEIIIELT ISAY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle