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View Structure Prediction Details

Protein: tbc-14
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-14.

Description E-value Query
Range
Subject
Range
gi|114645867 - gi|114645867|ref|XP_001159473.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
381.0 [0..29] [392..8]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPYMAYRYV KNKREKNQRE MDSDLDSMVR SIVPDKTVIC VPNVAAKLGE DSKEYIPGTL  60
   61 SIVEKSSGVF IEWKPSEDAE TSWVMTSDDG NTEMVHARSP EEKQKCGARV AFSMDVNDLS 120
  121 SFRNDEPKRG SGGFPSIRLI CRDGSSQVPL FFKNTTTAEF LDRLQGYITL RRSHRDSHLV 180
  181 IVV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2cayA
Description: No description for 2cayA was found.

Predicted functions:

Term Confidence Notes
binding 0.46923761062082 bayes_pls_golite062009
protein binding 0.127111860178639 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [184-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQKSEALAKS VSMLDENGDI LSRFMQNPYM TAMTGFSKIT SFVQDQVIPS VLNDTDAVTQ  60
   61 EEKIRLMREL RLAEEQMRVH SDAAGEFEVV TQLELPPRPE IYRELPVSKD LWNSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [299-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLSNGSYDPM KLHHLKMNVF RGGLNAELRK EAWKCLLGYR QWHESDTDFQ TRRAELAKQY  60
   61 ENMKKQWMSV TEDQEKRFTK FVKRKSLVGE EIEND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle