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View Structure Prediction Details

Protein: tbc-14
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-14.

Description E-value Query
Range
Subject
Range
gi|114645867 - gi|114645867|ref|XP_001159473.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
381.0 [0..29] [392..8]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPYMAYRYV KNKREKNQRE MDSDLDSMVR SIVPDKTVIC VPNVAAKLGE DSKEYIPGTL  60
   61 SIVEKSSGVF IEWKPSEDAE TSWVMTSDDG NTEMVHARSP EEKQKCGARV AFSMDVNDLS 120
  121 SFRNDEPKRG SGGFPSIRLI CRDGSSQVPL FFKNTTTAEF LDRLQGYITL RRSHRDSHLV 180
  181 IVV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2cayA
Description: No description for 2cayA was found.

Predicted functions:

Term Confidence Notes
binding 0.46923761062082 bayes_pls_golite062009
protein binding 0.127111860178639 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [184-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQKSEALAKS VSMLDENGDI LSRFMQNPYM TAMTGFSKIT SFVQDQVIPS VLNDTDAVTQ  60
   61 EEKIRLMREL RLAEEQMRVH SDAAGEFEVV TQLELPPRPE IYRELPVSKD LWNSF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [299-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLSNGSYDPM KLHHLKMNVF RGGLNAELRK EAWKCLLGYR QWHESDTDFQ TRRAELAKQY  60
   61 ENMKKQWMSV TEDQEKRFTK FVKRKSLVGE EIEND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle