| Protein: | scrm-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 265 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scrm-2.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..5] | [263..75] |
|
|
362.0 | [0..13] | [263..82] |
|
|
361.0 | [0..4] | [262..36] |
|
|
360.0 | [0..5] | [262..46] |
|
|
360.0 | [0..5] | [262..53] |
|
Region A: Residues: [1-265] |
1 11 21 31 41 51
| | | | | |
1 MDQLFYNGPP DYVEIEDRAI TTEPGASIQA APGAIWMEAL PAIEGIPAGL EYLAYLDTVM 60
61 VHQVKEVLEI LTGWESKNKY AIRNKNGQQC YYAFEESNAW ERQCCGSQRG FTMHIVDNFN 120
121 KNVLIVKREL RCCADSFCGC LLGLQNICTI ESLSTGLLGT VLQGYGCTNS FYNILDKDGN 180
181 LIFLVDGQGC CTSCCCEDKD FTIKTPDSSV PIGSITKKWG GLLREAFTDA DTFAVTFPID 240
241 LDVKLKAILL GATFLIDFVE FENNN
|
| Detection Method: |  |
| Confidence: | 3.22 |
| Match: | 1zxuA |
| Description: | X-ray structure of protein from arabidopsis thaliana AT5G01750 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| molecular transducer activity | 1.40960604634475 | bayes_pls_golite062009 |
| transmembrane receptor activity | 1.20555655112374 | bayes_pls_golite062009 |
| receptor activity | 1.15270506651032 | bayes_pls_golite062009 |
| binding | 1.05855974212836 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 0.94252200727689 | bayes_pls_golite062009 |
| protein binding | 0.6155304260359 | bayes_pls_golite062009 |
| photoreceptor activity | 0.504277760871571 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.450513229504489 | bayes_pls_golite062009 |
