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View Structure Prediction Details

Protein: CE15359
Organism: Caenorhabditis elegans
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE15359.

Description E-value Query
Range
Subject
Range
CE15361 - status:Partially_confirmed UniProt:O17018 protein_id:AAB69953.1
497.0 [0..1] [521..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEREALLHTS SFPKNSESSF PTKSISKSLL IIFALSNIAF FICFSKIKFS IGGSEIVRPE  60
   61 VIVSVPTETS TTTSTSLSST SQFISSTNAP ALRSPENKIF PQNSTNCPYE EWN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [114-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVRTDFIPNT DLHKQWSKKW KSNFKYLYHT LPSVAAAFLH EDQIVVTLTA ENQADEIVYC  60
   61 RYYDCRRREI MDHFESTIFP RGTVYCARRP GAKFITVSKT LKKILEYSVP IVSR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [228-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGKPQHYFTV CMAPLYGDEP KFLQIVDFIE YHKLQGATFF HIYLRNVSDY DRVLLDNYAK  60
   61 TGDIELITLQ DHFWRADYMW HNGQINDCHH RNRYFSKWTA LIDIDERLEM KSDKFKIVAD 120
  121 YLDSIQDDSI ANLHFRVKWV MKHHDTPAKY E

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.07
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.117862115002202 bayes_pls_golite062009
catalytic activity 0.075405962065044 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.00643109218840909 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [379-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NETQLKREML FHKYQNLSQL GAIWDQPKCI IRPENVAIMT IHGPREMYKG EKMTVVPENV  60
   61 GFIRHYRNVE LRIFHKAFER MMSHAPFNIS PIDKDIDQDL SKKIMDRVKW IYEIVQPTCE 120
  121 QKAKMYRVES TSPSCNNETK TLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle