| Protein: | CE14458 |
| Organism: | Caenorhabditis elegans |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE14458.
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..14] | [379..7] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MRPRRSDSTT GPAAKSLPTS DVEEDEAAPD LKAESEDVTS SEEMQNKNPV SAPEKRAKTA 60
61 SFSPPPALSP AHSIQMENEE IEVKMEVDSD EEEKKLPKIT EKRAK
|
| Detection Method: |  |
| Confidence: | 7.0 |
| Match: | 1aabA |
| Description: | NMR STRUCTURE OF RAT HMG1 HMGA FRAGMENT |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.26567769591593 | bayes_pls_golite062009 |
| nucleic acid binding | 0.818311652354687 | bayes_pls_golite062009 |
| DNA binding | 0.811818342611352 | bayes_pls_golite062009 |
| protein binding | 0.751190715138185 | bayes_pls_golite062009 |
| transcription regulator activity | 0.381276648599631 | bayes_pls_golite062009 |
|
Region A: Residues: [106-221] |
1 11 21 31 41 51
| | | | | |
1 MVYKKKPEKE KEAVPFIDPN APKRNRSGYV HFIIHRRASY SKAVMSQREI NISLAADWQK 60
61 LTAEERIPFQ QRADEEKVKY LELMEEYKKT DSHKEFQKKR AKFLSSQSNG SKNAKK
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 2gzkA |
| Description: | No description for 2gzkA was found. |
| Term | Confidence | Notes |
| binding | 2.26567769591593 | bayes_pls_golite062009 |
| nucleic acid binding | 0.818311652354687 | bayes_pls_golite062009 |
| DNA binding | 0.811818342611352 | bayes_pls_golite062009 |
| protein binding | 0.751190715138185 | bayes_pls_golite062009 |
| transcription regulator activity | 0.381276648599631 | bayes_pls_golite062009 |
|
Region A: Residues: [222-386] |
1 11 21 31 41 51
| | | | | |
1 RRQADSDDDT PNVQIPFPKP SVFCPLLSPE PATSSSTSGL QYSGPIFTPE FMTYNKTRDT 60
61 YRRQLAIERS HVEHELEALH QHDMDVRIEQ QETRIREADE KIEETMAKMR TVLAAVPGAK 120
121 DHLTSIDALA TWLESLTHLG AQNSTKKSVK EAVNKNAKSI VQMKK
|
| Detection Method: | |
| Confidence: | 6.221849 |
| Match: | 1v63A |
| Description: | Solution structure of the 6th HMG box of mouse UBF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.26567769591593 | bayes_pls_golite062009 |
| nucleic acid binding | 0.818311652354687 | bayes_pls_golite062009 |
| DNA binding | 0.811818342611352 | bayes_pls_golite062009 |
| protein binding | 0.751190715138185 | bayes_pls_golite062009 |
| transcription regulator activity | 0.381276648599631 | bayes_pls_golite062009 |
