| Protein: | mom-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 568 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mom-5.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..6] | [560..459] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MHRHILILFL FGCLSADQRL SSTSISSMNG FSTTRKCEHI TIPMCKNLDY NQTVFPNLLG 60
61 HTTQSEAGPA IAQFNPLIKV KCSEDIRLFL CTVYAPVCTV LEKPIQPCRE LCLSAKNGCE 120
121 SLMKKFGFQW PDQLDCNKFP VTDLCVGKNS SESSNSKKSS NDV
|
| Detection Method: |  |
| Confidence: | 34.30103 |
| Match: | 1ijyA |
| Description: | Frizzled 8 (FZ8) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Wnt receptor activity | 5.34849208575619 | bayes_pls_golite062009 |
| Wnt-protein binding | 4.48351937520811 | bayes_pls_golite062009 |
| transmembrane receptor activity | 4.38708793497137 | bayes_pls_golite062009 |
| receptor activity | 4.1046853496316 | bayes_pls_golite062009 |
| signal transducer activity | 3.17034085692897 | bayes_pls_golite062009 |
| molecular transducer activity | 3.17034085692897 | bayes_pls_golite062009 |
| binding | 1.75284371400205 | bayes_pls_golite062009 |
| protein binding | 1.1012033332744 | bayes_pls_golite062009 |
|
Region A: Residues: [164-568] |
1 11 21 31 41 51
| | | | | |
1 TFGVSTIANE VVLSPKKCPH HMHTTSGSHF SLPLLSGRLP ECSLTCEADN QVPMMFDGRV 60
61 RRILRIWTAA WSVACFVCSL FTLVTFLVDL SRFAYPVRPI LYLAFCYLAI STVYMIGVVG 120
121 EDGFACGTYG STPTTLVTQG GENVGCSALA VVHYFFFMSS CAWWLVLCLA WFLAANLKWG 180
181 AESIAALSPY FHAMCWGVPA VLSVTVLVTN SVDGDVFTGI CSVGNLNPSA LVYFFFTPIV 240
241 VSLALGAVLL VCGIWSMIRI RSYIKLQHAD VERNISKLEK LMLRIGAFAI MYSLPTAMNA 300
301 AIMWYQAVNM PAWLEGWLHH RCVRLQDREL FGFTYPVDDC PMDPKVAAPE IIVFLLKYVS 360
361 QLVVGITCAI WVVSSKTLSS YHKAYLALSS RSPTVPAHVD QVNMR
|
| Detection Method: | |
| Confidence: | 30.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
