| Protein: | CE13385 |
| Organism: | Caenorhabditis elegans |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13385.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..9] | [339..123] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MDEEGSRSSI TDEEDYVDDN DNGEDYEATI EEEELLDEGD YEDELKDLED EGEMSIEELQ 60
61 RKYGYRPAEN SSANNEDTEI AEENVGESSS AAAEPHDSTI FDMGNSMSGF DDDDDDYAPP 120
121 PDPWKRS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-223] |
1 11 21 31 41 51
| | | | | |
1 IRVDPVLFQA DVPLFNEATV EESAREDDTI LWTIDQTNQP SDEVIDNYLK DVVGLRKAHD 60
61 QPCPPAGTES RDDEDALCAL YRSNFDTEKA KESFPF
|
| Detection Method: | |
| Confidence: | 10.017729 |
| Match: | PF01448.15 |
| Description: | No description for PF01448.15 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [224-345] |
1 11 21 31 41 51
| | | | | |
1 PHINAPFRTV RSDALGFDES EAKAFEESLE LYGKDFSLIR RLRLPYRKVG ELIEYYYQWK 60
61 LTPGYRVWRD AHPQHAPVVQ PHLSAAWHQQ VAQLEDQNGQ TGFVEASFSE PSTSEEPSTL 120
121 TN
|
| Detection Method: | |
| Confidence: | 14.154902 |
| Match: | 2crgA |
| Description: | Solution structure of the myb-like DNA-binding domain of mouse MTA3 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.25140430108186 | bayes_pls_golite062009 |
| transcription regulator activity | 1.0511502747891 | bayes_pls_golite062009 |
| DNA binding | 0.851610480849472 | bayes_pls_golite062009 |
| nucleic acid binding | 0.619804046637637 | bayes_pls_golite062009 |
| transcription factor activity | 0.55844875619394 | bayes_pls_golite062009 |
| protein binding | 0.134872960372588 | bayes_pls_golite062009 |
