| Protein: | CE13279 |
| Organism: | Caenorhabditis elegans |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13279.
| Description | E-value | Query Range |
Subject Range |
|
|
590.0 | [0..9] | [443..1] |
|
Region A: Residues: [1-443] |
1 11 21 31 41 51
| | | | | |
1 MSAPAAGATA GGDDAADRNV EMWKIKRLIK SLELARGNGT SMISLIIPPK DQVARIQRML 60
61 AEEYGTASNI KSRVNRLSVL GAITSVQGRL KLYNKVPPNG LVVYCGTIMT DEGKEKKVNI 120
121 DFEPFKAINT SLYLCDNKFH TEALQGLLAD DNKFGFIIMD GNGCLFGTLQ GNTREVLHKF 180
181 TVDLPKKHGR GGQSAVRFAR LRNEKRHNYV RKVAENSVEQ FIKNDKVTVA GLILAGSADF 240
241 KTELGQSDMF DQRLQAKMIK TVDIAYGGEN GFNQAIELAA DTLASVKFIQ EKKLIGGYFD 300
301 EISQDTGKYV FGVKDTLAAL EMGAIETLIC WENLDIVRYK MKNSLGEDIL LNLRPDEEKD 360
361 KSHFTDSETG QDMEIIETMP LLEWFANNYK NFGAALEIVT DKSQEGAQFV RGFGGIGGLL 420
421 RYRVDLAHVD LEDELDNIDL DDY
|
| Detection Method: |  |
| Confidence: | 169.0 |
| Match: | 1dt9A |
| Description: | Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1; C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1; N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| translation release factor activity | 11.5102558694213 | bayes_pls_golite062009 |
| translation termination factor activity | 11.4768548464911 | bayes_pls_golite062009 |
| translation release factor activity, codon specific | 7.66455753522311 | bayes_pls_golite062009 |
| structural constituent of ribosome | 2.97154934968642 | bayes_pls_golite062009 |
| nucleic acid binding | 2.70960972397471 | bayes_pls_golite062009 |
| structural molecule activity | 2.64319832043379 | bayes_pls_golite062009 |
| binding | 2.24516466558786 | bayes_pls_golite062009 |
| translation regulator activity | 1.83257472130927 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 1.81472167858216 | bayes_pls_golite062009 |
| RNA binding | 1.59103459949328 | bayes_pls_golite062009 |
| mRNA binding | 0.607146672130391 | bayes_pls_golite062009 |
| protein binding | 0.381324299701367 | bayes_pls_golite062009 |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
