| Protein: | sepa-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 702 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sepa-1.
| Description | E-value | Query Range |
Subject Range |
|
|
505.0 | [0..7] | [473..18] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MTPLSALTSN PAPSPPPKFA LGKCPATAIH VVSVLRPNRQ RFCYEKTDAG DLIPHKCLIC 60
61 QPILTEKHIS PYYAVYSDLL EDFVLFGYNT MTGKMEQFIY AFK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-196] |
1 11 21 31 41 51
| | | | | |
1 TDCFVEVNRP EIKYNPAFLV KGNVVVALNG PEGELVVIER DCRGLLSKES TSYGQFRTLP 60
61 TAALRTLTLQ DLERDRWDRA ANSDEVKISS GNE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [197-308] |
1 11 21 31 41 51
| | | | | |
1 SFDRLYAEYQ KNLPRFQVRQ CLHLNKEFLC VYSKTSGDYT RLEYIDETGD FQKISCTLCT 60
61 CEVTESNLIP LYVERNASEL VIHVHNTENN QIEQYIYDVR TFGFVQVKRN LV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [309-389] |
1 11 21 31 41 51
| | | | | |
1 YDPKKITSGL NLFMAENIDN RKVYMIMRGR DGRLQKETSG SGGFEKMQPV AVKTFQVQWV 60
61 EMKTEFEKKK ASTERVEPQH P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [390-470] |
1 11 21 31 41 51
| | | | | |
1 VQTEGEDIME TVLAMVESFN CDLRKELGLT QDQEIPRKAP RVESAETEEN IVKNLEKLQI 60
61 AKDPEEPTTA ASEGGNTYGY Q
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 1r8uB |
| Description: | NMR structure of CBP TAZ1/CITED2 complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-593] |
1 11 21 31 41 51
| | | | | |
1 ELDDTMSEGL LEKEAESKHQ DANEPEPVKN VTYEPDVAAM DKKKKRRELK SRLNKINAQI 60
61 DELEKRRMER AGKKQVVSSS VPSEEAAQVE APASPALAEN TNQISNEETP KIDIFEGYNG 120
121 SFL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [594-702] |
1 11 21 31 41 51
| | | | | |
1 FGTNTSKEWI VEDIRNHMVG KLLKAFWPRI QNVEEMNGEL FKKLIANARK CETEILEASN 60
61 DRDEYYRLMQ LTVDQILKKT LKKDQRATEH NHQQPTQSSD ELAKNHEKN
|
| Detection Method: | |
| Confidence: | 40.522879 |
| Match: | 1sb0A |
| Description: | Solution structure of the KIX domain of CBP bound to the transactivation domain of c-Myb |
Matching Structure (courtesy of the PDB): |
|
