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View Structure Prediction Details

Protein: CE12180
Organism: Caenorhabditis elegans
Length: 391 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE12180.

Description E-value Query
Range
Subject
Range
CE12576 - status:Confirmed UniProt:O01593 protein_id:AAB52277.1
231.0 [0..40] [391..13]

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Predicted Domain #1
Region A:
Residues: [1-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATISCGSRF LSIRCFSIEL NSFGSFLYYF LHFRIKKMLD RLTDLAIGNV ISNAINIGNR  60
   61 LNIFKAIAEI SNEENPVLPE QIAAKAGCKE RYVREWCNTL ACGNILEVNE KEEFWISKEN 120
  121 VEALTNTSFQ LMFHTMLPTV LRPIDSLIEC FKKDGPYGLD YSIYSDFEDM QAMFTKTVYE 180
  181 QHMISGLIPA FGNGIKEKLE DGGFRVLDVG CGEGFHSCLL AENYSKSQFV GLDICEKAIK 240
  241 SAKLNKKSDG SDFQNLEFVV GDAMIMPEDW TGCFDLVAFF GSLHDLLRPD LSLLEVHRVL 300
  301 KPGGMVVLTE SDGTSNVFQD REAFGKMSAL QYGGSMLHCL PVGSNSSDAM GYGSMWGRKR 360
  361 ATELMTKCGF KDIEITPIIH FPGSVFYVLK K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.522879
Match: 1kywA
Description: Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.723277178398499 bayes_pls_golite062009
transferase activity 0.64512166557639 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.54403439349476 bayes_pls_golite062009
methyltransferase activity 0.54389223881989 bayes_pls_golite062009
transcription regulator activity 0.4843036104266 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle