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View Structure Prediction Details

Protein: CE12032
Organism: Caenorhabditis elegans
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE12032.

Description E-value Query
Range
Subject
Range
CE07085 - status:Predicted UniProt:Q19599 protein_id:AAG24065.1
547.0 [0..1] [410..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRMDPKSH DVIVDDLDFS TMPGTQTCIQ NSRWTVVNLK NAFQAEGPWE FVLGNSSRSY  60
   61 LNLKRTYLVY TFNITDQNGA IVNIPNPITK DSLVYAPINN IAHSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNFSLHINSR LAYHNSSNYA YKAYFENALM YGKEIKNSTL TAAGYFHEDE IGSPTSKGFL  60
   61 NRCGTGTTQV AANISLDLMN QPRVLLNSCN VKLTAYPNNS EFLIEAYNHG QQKFKFNVTD 120
  121 VYALVNEFDL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [237-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDGLSNELEA AIIEHKMIQY PMISSQVRSC YIDGGRFDAP ANTLFTSKMP RRLFLGLVSS  60
   61 EAYNGSFGTT PFNFKPYGVQ DVHIDYCGQT IPGRPMN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [334-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDFENNKSKG YTIFGFELSP VAQDNNLFEL VRQTNVSVRL NFKKETPPGG LYCIVYAEFD  60
   61 QIFALDFMRN PIVDSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle