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View Structure Prediction Details

Protein: CE12032
Organism: Caenorhabditis elegans
Length: 410 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE12032.

Description E-value Query
Range
Subject
Range
CE07085 - status:Predicted UniProt:Q19599 protein_id:AAG24065.1
547.0 [0..1] [410..1]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRMDPKSH DVIVDDLDFS TMPGTQTCIQ NSRWTVVNLK NAFQAEGPWE FVLGNSSRSY  60
   61 LNLKRTYLVY TFNITDQNGA IVNIPNPITK DSLVYAPINN IAHSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNFSLHINSR LAYHNSSNYA YKAYFENALM YGKEIKNSTL TAAGYFHEDE IGSPTSKGFL  60
   61 NRCGTGTTQV AANISLDLMN QPRVLLNSCN VKLTAYPNNS EFLIEAYNHG QQKFKFNVTD 120
  121 VYALVNEFDL 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [237-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDGLSNELEA AIIEHKMIQY PMISSQVRSC YIDGGRFDAP ANTLFTSKMP RRLFLGLVSS  60
   61 EAYNGSFGTT PFNFKPYGVQ DVHIDYCGQT IPGRPMN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [334-410]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDFENNKSKG YTIFGFELSP VAQDNNLFEL VRQTNVSVRL NFKKETPPGG LYCIVYAEFD  60
   61 QIFALDFMRN PIVDSIV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle