| Protein: | hil-6 |
| Organism: | Caenorhabditis elegans |
| Length: | 190 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hil-6.
| Description | E-value | Query Range |
Subject Range |
|
|
133.0 | [0..29] | [187..433] |
|
|
133.0 | [0..29] | [187..322] |
|
|
132.0 | [0..15] | [190..408] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MSDVAVAETP AVKTPTKAPK ANATKVPKVK TAAAHPPFIN MVTAAISSLK ERKGSSKIAI 60
61 LKYITANYKL GDQVKKINSN LRSALKKGVA SKALVQTVGT GATGRFRVAE KTAATAKKPT 120
121 VKKAATGEKV KKTVVKKTVA KKTGDKVKKA KSPKKIAKPA AKKATKSPSK KVAPKKAAAK 180
181 PAKKTAALKA
|
| Detection Method: |  |
| Confidence: | 12.045757 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
