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View Structure Prediction Details

Protein: CE11322
Organism: Caenorhabditis elegans
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE11322.

Description E-value Query
Range
Subject
Range
CE28472 - status:Partially_confirmed UniProt:Q95R04 protein_id:AAK73885.1
268.0 [0..1] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRALFSSI LFSFKTYFSK KIDSVFQMSS SELIAELERE RDRRVLSIQS HVVHGYAGNK  60
   61 CSVFPLQLHG FEVDFINSVQ FSNHAGNIEY LTLPTRYEHV KGQKLTEKEL EELYEGLTLN 120
  121 NINNYTHVLT GYCGNVTFLQ KIADVVKDLK KKNGNTTFVC DPVMGDNGRY YTPKELMPVY 180
  181 RDLIIPLADV LTPNAFELGE LTGSPIETEE DCLRAVNELH AKGVKTVVVT SGVTGAQTNE 240
  241 SLRCYASVKG SHVYRFTFPR LVGQFVGTGD TFTSLLVVWL DELNGDVSEA VKRVLASMQC 300
  301 LIRKTSSYAQ LQVDTNSRAM CELRLIQSRK DLLWPPTCDQ IQVEKIGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1lhpA
Description: Pyridoxal kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
kinase activity 3.96411195020495 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 3.67035256855428 bayes_pls_golite062009
transferase activity 3.30865420017814 bayes_pls_golite062009
lithium ion binding 3.00550221878163 bayes_pls_golite062009
sodium ion binding 2.93046843966773 bayes_pls_golite062009
pyridoxal kinase activity 2.62798458074822 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.56927916030784 bayes_pls_golite062009
phosphomethylpyrimidine kinase activity 2.12104666683074 bayes_pls_golite062009
pyridoxal binding 2.04719269680858 bayes_pls_golite062009
catalytic activity 1.74474587246986 bayes_pls_golite062009
binding 1.4216897826135 bayes_pls_golite062009
carbohydrate kinase activity 1.32862180479506 bayes_pls_golite062009
nucleic acid binding 1.23363144435362 bayes_pls_golite062009
transcription regulator activity 1.21529398967164 bayes_pls_golite062009
potassium ion binding 1.18018952731159 bayes_pls_golite062009
alkali metal ion binding 1.18018952731159 bayes_pls_golite062009
DNA binding 0.954497955488766 bayes_pls_golite062009
transcription factor activity 0.376784274163604 bayes_pls_golite062009
protein binding 0.117280046908929 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle