| Protein: | stau-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 705 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stau-1.
| Description | E-value | Query Range |
Subject Range |
|
|
422.0 | [0..71] | [705..1] |
|
Region A: Residues: [1-149] |
1 11 21 31 41 51
| | | | | |
1 MQAVFETTLT QKMDGVMIVQ ETTTDLADTL ENASISAEKS EQKPERLHPQ HWCGQHKFEA 60
61 DSPTNFYDYT NAKEKEKSAM CRVAEIARFN KLRHVYNLQD ESGPAHKKLF TVKLVLTEAE 120
121 TFEGSGTSIK RAQQASAEAA LKGTKLPLP
|
| Detection Method: |  |
| Confidence: | 35.0 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.602312874472495 | bayes_pls_golite062009 |
|
Region A: Residues: [150-281] |
1 11 21 31 41 51
| | | | | |
1 TEKPTKKRIN DTTKPHRVLQ NVCRTLQYQM PNYISCNPPV YPDPGCPLPE HILLPLESMA 60
61 LYAPPFPTLP IDPARPQGPK LQAVIVNING KSIATGIGET YPLAKQDAAA KALAVLSPLL 120
121 REHQNGSDNG FG
|
| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1whnA |
| Description: | Solution structure of the dsRBD from hypothetical protein BAB26260 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.473490732431909 | bayes_pls_golite062009 |
|
Region A: Residues: [282-531] |
1 11 21 31 41 51
| | | | | |
1 KENIPVHKQK SVISDIHEKA YQLKVNVVFE VLKEEGPPHD RQYVVRCAFV TSGNVVKAEA 60
61 VGKGKKKKSA QQEACTQLLA TVEHLTPENN PVALATNVCK TQKKLAAMNR EPKRKTIVKD 120
121 KKMDPLYGHQ INPVSRLIQV TQAKSKEHPT FELVAEHGVS KYKEFIIQVK YGDDVQEGKG 180
181 PNKRLAKRAA AEAMLESIGF VKPLPPPGKS LLKKMIDCDP SLPEISHWTG PPPTAVSVST 240
241 SEPDTSEAAQ
|
| Detection Method: | |
| Confidence: | 22.69897 |
| Match: | 2yt4A |
| Description: | No description for 2yt4A was found. |
|
Region A: Residues: [532-628] |
1 11 21 31 41 51
| | | | | |
1 LSPEQTDISE KRELSPDTEK RRVTFNSQVH ACPPPGDQDY PNSIVQSLKK DAIVEGKIRR 60
61 LKRSKENRRA LTAEQIVELS ERAQSYLQTK NTTIQSS
|
| Detection Method: | |
| Confidence: | 7.0 |
| Match: | 2a19B |
| Description: | PKR kinase domain- eIF2alpha- AMP-PNP complex. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [629-705] |
1 11 21 31 41 51
| | | | | |
1 QSSSAHHHLE QLSDFFKFSL QYTSFPQVGI DQHFTIVSIG LEAPLVGHGT GCSTTEADEN 60
61 AALDAIAKLK ELSASKT
|
| Detection Method: | |
| Confidence: | 2.13 |
| Match: | 1ekzA |
| Description: | Staufen, domain III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.473490732431909 | bayes_pls_golite062009 |
