| Protein: | cey-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 267 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cey-2.
| Description | E-value | Query Range |
Subject Range |
|
|
252.0 | [0..1] | [267..1] |
|
|
251.0 | [0..1] | [267..1] |
|
|
197.0 | [0..1] | [231..110] |
|
|
193.0 | [0..1] | [231..1] |
|
|
193.0 | [0..1] | [231..1] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MSDTANAAVE IGEEALEQKL EELSVQDKTT PSNSEEKMRK RRLPTAERIR LWEEEQKSKT 60
61 AITTGLQGKV KWYSVLRRYG FISRNDGEKD IFVHQTAIAK SATEKFYLRT LGDDEEVLFD 120
121 LVEGKNGPEA ANVTGP
|
| Detection Method: |  |
| Confidence: | 30.69897 |
| Match: | 1h95A |
| Description: | Y-box protein 1 cold shock domain (YB1-CSD) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.941133136037614 | bayes_pls_golite062009 |
| nucleic acid binding | 0.326665240002183 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.0364468926264701 | bayes_pls_golite062009 |
|
Region A: Residues: [137-267] |
1 11 21 31 41 51
| | | | | |
1 NGDNVIGSRY RHKLLSRFRK NRKPRASVDG EESQSTDAKP QEMSADAEKK KPRKQRKNRN 60
61 RKSKAQQKGA GDAADSSAVT ESSESASDVA SPDSKSCSKI ITEEAGLSKV DRCDSALGEA 120
121 GLGAQPIDAQ I
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2cqfA |
| Description: | Solution Structure of the Zinc-finger domain in LIN-28 |
Matching Structure (courtesy of the PDB): |
|
