| Protein: | CE09413 |
| Organism: | Caenorhabditis elegans |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09413.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..2] | [501..22] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MATESALIKV HVKSPSNKYD VEIAADASVS ELKDKVLVFV PTANKEQVCI IYTGKILKDE 60
61 ETLTQHKIAD GHTVHLVIRN QARPTPAPAA ATPTA
|
| Detection Method: |  |
| Confidence: | 18.0 |
| Match: | 1wx7A |
| Description: | Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [96-248] |
1 11 21 31 41 51
| | | | | |
1 SSAPSSNPTP SSQPNPTNNP FAAMGGMGSP ADILNNPDAM RSVMDNPITQ QLLGNPEFMR 60
61 TIIQSNPQFQ ALIERNPEVG HILNDPNVMR QTMEMIRNPN MFQEMMRNHD QAIRNLQGIP 120
121 GGEAALERLY NDVQEPLLNS ATNSLSGNPF ASL
|
| Detection Method: | |
| Confidence: | 0.984 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [249-423] |
1 11 21 31 41 51
| | | | | |
1 RGDQSSEPRV DRAGQENNEA LPNPWASNAN QATNNQSNNR SADFNSLLDS PGISSLMEQM 60
61 MSNPSMQASM FSPEVINSIR QNMSNNPGLI DSIVGQIPSA RDNPQISEGI RRSFPQMLNM 120
121 MSDPSVMEAM RNPRVSEAFR QIQEGFSTLR REAPQLLNLF QAGAMGGGAF GSDAN
|
| Detection Method: | |
| Confidence: | 7.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-502] |
1 11 21 31 41 51
| | | | | |
1 ASSAGANSAN GLADLFNSMN MGGGRPSSTA APVNPEQTYA SQLEQLQSMG FSDRARNVAA 60
61 LTATFGDLNA AVERLLNSP
|
| Detection Method: | |
| Confidence: | 9.30103 |
| Match: | 1vejA |
| Description: | Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
