| Protein: | fat-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 338 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fat-7.
| Description | E-value | Query Range |
Subject Range |
|
|
273.0 | [0..3] | [332..65] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MTVKTRASIA KKIEKDGLDS QYLFMDPNEV LQVQEESKKI PYKMEIVWRN VALFAALHVA 60
61 AAIGLYELVF HA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [73-256] |
1 11 21 31 41 51
| | | | | |
1 KWQTAVFSFA LYVFSGFGIT AGAHRLWSHK SYKATTPMRI FLMLLNNIAL QNDIIEWARD 60
61 HRCHHKWTDT DADPHNTTRG FFFTHMGWLL VRKHPQVKEH GGKLDLSDLF SDPVLVFQRK 120
121 HYFPLVILFC FILPTIIPVY FWKETAFIAF YVAGTFRYCF TLHATWCINS AAHYFGWKPY 180
181 DTSV
|
| Detection Method: | |
| Confidence: | 54.60206 |
| Match: | PF00487.15 |
| Description: | No description for PF00487.15 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [257-338] |
1 11 21 31 41 51
| | | | | |
1 SAVENVFTTV VAVGEGGHNF HHTFPQDYRA SEYSLIYNWT RVLIDTAAVL GLVYDRKTIA 60
61 DEFISRQVAN HGSEESRKKS IM
|
| Detection Method: | |
| Confidence: | 0.95 |
| Match: | 2fb7A |
| Description: | NMR Solution Structure of protein from Zebra Fish Dr.13312 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.94860296869191 | bayes_pls_golite062009 |
| nucleic acid binding | 1.26466306957888 | bayes_pls_golite062009 |
| 0.945085841934941 | bayes_pls_golite062009 | |
| ion transmembrane transporter activity | 0.791043506451232 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.513718335786021 | bayes_pls_golite062009 |
| channel activity | 0.508908363981246 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.508908363981246 | bayes_pls_golite062009 |
| ion channel activity | 0.48450711672603 | bayes_pls_golite062009 |
| protein binding | 0.324773795352801 | bayes_pls_golite062009 |
| RNA binding | 0.235451774909524 | bayes_pls_golite062009 |
