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View Structure Prediction Details

Protein: fbxb-6
Organism: Caenorhabditis elegans
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxb-6.

Description E-value Query
Range
Subject
Range
CE08553 - WBGene00016337 locus:fbxb-38 status:Partially_confirmed TR:O16577 protein_id:AAB66057.1
193.0 [0..45] [369..112]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKDQNSIV FQKIIFENFS TTEIFQKKSG KPESKLYWEA VHQSSSCPQT LSIFTNYLHI  60
   61 FPINQHLARQ VASYYSYPSP IVLEHSFVVM TTTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTFSLLQLP TKALKMVLTQ DIDFMIWFSF CSNRSKSVVQ NLQIDYLHIE CGFSRQNVLY  60
   61 VMFGDTMLWA SE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [167-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSTISDDMIE ESVIIGQKLK HKLKAYIDHA YSVLNQPSFY VDVHCNEDGL RTYEFLENAI  60
   61 EDVKIRRTTL SGSGPPYLLN AKRFWRRFIL PVQQIDLCQK LFETAVQSHR LLLQNFDYLG 120
  121 INLGSNGKPH SILAMNNDFN Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [308-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFPVDTVNSQ LIFQHLHPLP EDLDDSSVQH LINRLRLESI DLKEFNMTEW MAALVRGQEL  60
   61 HEITLGKFEK LTNFAKKINA SAWNVKIVSL LEHMIQLDKR SKLTYLNLSP SWLPRTEGLL 120
  121 EEHFGIGWAK KVSSRVWRKE AAEWKVHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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