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View Structure Prediction Details

Protein: fbxb-6
Organism: Caenorhabditis elegans
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fbxb-6.

Description E-value Query
Range
Subject
Range
CE08553 - WBGene00016337 locus:fbxb-38 status:Partially_confirmed TR:O16577 protein_id:AAB66057.1
193.0 [0..45] [369..112]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKDQNSIV FQKIIFENFS TTEIFQKKSG KPESKLYWEA VHQSSSCPQT LSIFTNYLHI  60
   61 FPINQHLARQ VASYYSYPSP IVLEHSFVVM TTTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTFSLLQLP TKALKMVLTQ DIDFMIWFSF CSNRSKSVVQ NLQIDYLHIE CGFSRQNVLY  60
   61 VMFGDTMLWA SE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [167-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSTISDDMIE ESVIIGQKLK HKLKAYIDHA YSVLNQPSFY VDVHCNEDGL RTYEFLENAI  60
   61 EDVKIRRTTL SGSGPPYLLN AKRFWRRFIL PVQQIDLCQK LFETAVQSHR LLLQNFDYLG 120
  121 INLGSNGKPH SILAMNNDFN Y

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [308-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFPVDTVNSQ LIFQHLHPLP EDLDDSSVQH LINRLRLESI DLKEFNMTEW MAALVRGQEL  60
   61 HEITLGKFEK LTNFAKKINA SAWNVKIVSL LEHMIQLDKR SKLTYLNLSP SWLPRTEGLL 120
  121 EEHFGIGWAK KVSSRVWRKE AAEWKVHD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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