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View Structure Prediction Details

Protein: CE09076
Organism: Caenorhabditis elegans
Length: 512 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09076.

Description E-value Query
Range
Subject
Range
gi|39592068, gi|... - gi|39592068|emb|CAE75288.1| Hypothetical protein CBG23256 [Caenorhabditis briggsae], gi|187021163|em...
gi|157762754 - gi|157762754|ref|XP_001673719.1| Hypothetical protein CBG23256 [Caenorhabditis briggsae AF16]
329.0 [0..1] [510..1]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIRKILAFK PLTKVLFVGT GAGAGYTAYT VDSVEDLRQL GLLRFGRAAS TVGKIVIDYK  60
   61 TSLRGLPEPS SEYDDAIKKC HQRSAEHLLE LACVNGGVFI KVGQHISGME YLIPPEYTQT 120
  121 LSILTSQAPQ ASKEDVIYVV ESELNAKVGD LFSEFSEKPV GAASLAQVHK AKLKESGETV 180
  181 AVKVQHKRVY KNSRTDVNTM EFLVKVADAV FPEFRLMWLV DEIKKNLPNE LDFLHEAKNA 240
  241 DEAAQRFKHL KFLRIPKIKY DLTTTRVLTM EFCEGAHVDD VEYLKKNNID PHDVCMKIGK 300
  301 TISEMIFLQG YLHSDPHPGN VLINSLGNGK YEIVLLDHGL YLNISDHIRK LYSDLWLAIL 360
  361 KPDLQEIRKV ASQMGVGELY GLFACMVTRR SWKSVTGGIG KSKMNESEKD ELRMYASSLI 420
  421 PQISEVLARM PREMLLILKT NDLMRNIEHK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.0
Match: 2fo0A
Description: No description for 2fo0A was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 0.992326239767221 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.952736015121484 bayes_pls_golite062009
kinase activity 0.887449738641687 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.826422905101088 bayes_pls_golite062009
transferase activity 0.592356370285824 bayes_pls_golite062009
binding 0.468768937960882 bayes_pls_golite062009
catalytic activity 0.450122697269263 bayes_pls_golite062009
protein serine/threonine kinase activity 0.372809552991468 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [451-512]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGVFGSSDGH IEMSRCVIRS SHDLAIRRSD SLLGKFKIGF HMYWSLMKLC IYQYYLRFIN  60
   61 YH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.30103
Match: 1m7qA
Description: MAP kinase p38
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle