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View Structure Prediction Details

Protein: uri-1
Organism: Caenorhabditis elegans
Length: 446 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for uri-1.

Description E-value Query
Range
Subject
Range
gi|70883026 - gi|70883026|gb|EAN95962.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|71661587 - gi|71661587|ref|XP_817813.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
148.0 [0..33] [445..100]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELYVAECN AAKARLEVET ECRRIIADNY EKVLERAKEY SKKLEAPILA KICEVGYFCG  60
   61 AHVVRTNQVT MEMGANYYGE CSIHTAEKIL DRRVSEMRRQ REEGLDSIRM LDDKIKFAQD 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.63
Match: 1fxkC
Description: Prefoldin alpha subunit
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [121-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFSSVSIDGG PIEIVEKYDE EMEKLFYQNR KNKKMSQNDE QNEKIIEKNK LNGDQDHNDV  60
   61 MNRLEELEKL EQDNDEMEEA PIPKPFEVSN EDLQDLGKLE EVEEVEQDPT DKKLRFGMNE 120
  121 RLLAQPGVTQ KEMERLLDFL DTCDEESSDE EYDEDEEEGD DDEENLNNSV EELDSDDYAS 180
  181 DDNIEKSNNS DQQLKSKKIE TQVIKVEEIV EETVTKTTVK RKKSGVRFAQ QLENVKTFHQ 240
  241 TDTVEIKEED SVIETKSILR STEPTPVDRS ALEPEQKELA AMSTMTFPGE IVEKNPYECE 300
  301 PSTSRDPAPV ITEKKVSKFR ASRHRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.09691
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle