| Protein: | CE08876 |
| Organism: | Caenorhabditis elegans |
| Length: | 713 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08876.
| Description | E-value | Query Range |
Subject Range |
|
|
520.0 | [0..34] | [713..1] |
|
Region A: Residues: [1-546] |
1 11 21 31 41 51
| | | | | |
1 MLKHLFLFLF IKSSIAYNFY WYDKTQTLQN RQTMVHLFEW KWADVAKECE NFLQYYGYGA 60
61 VQVSPPMEHL KAFPNNNYPW WVRYQPVSYK LDSRSGNEQE FQDMVNRCNK VGVRIIVDIV 120
121 MNHMVGIGQK SGNGVGSSGS SSFDGTHGVQ SFPGVPYSLG DFNNPKCDGD IQGSDYQNSA 180
181 EHVKDCRLVG LLDLNQASAT VRAKIVAYLN KLVDMGVAGF RHDASKHMWP QDILNILNDV 240
241 KDLRSDIYGS NQRPFAVHEV IDRGGEAVKC GDYFGNGRYT NFNFGAAVSA AAKQQSDWKY 300
301 LANLGPGYGY GNNEDHDVLN FIDNHDNQRD SSPYVVTYKD GQKYNLAVGF MLAWPYGYPR 360
361 VMSSFAFSYS DQSPPNSGAS NDYATTSPTF NGDQTCNSNS GWVCEHRWPA IRQMAKFRSA 420
421 VQGTAAADIV TDTRRIAFAR DGKGFFALNQ QDGAWTKIFA TNLPAGDYCD HFSGGLDNGK 480
481 CVGTKITVRD DHTSYLSVPS NSIVAISLDS KLTPYTPPAP PSGYSTTVIL LKKDTNPGQN 540
541 IFVRGG
|
| Detection Method: |  |
| Confidence: | 100.0 |
| Match: | 1bsiA |
| Description: | HUMAN PANCREATIC ALPHA-AMYLASE FROM PICHIA PASTORIS, GLYCOSYLATED PROTEIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 4.11319792356479 | bayes_pls_golite062009 |
| hydrolase activity, acting on glycosyl bonds | 3.92012282533754 | bayes_pls_golite062009 |
| hydrolase activity | 2.30046070709431 | bayes_pls_golite062009 |
| catalytic activity | 1.85569074294201 | bayes_pls_golite062009 |
| chitinase activity | 1.8132391603727 | bayes_pls_golite062009 |
| amylase activity | 1.38959979746158 | bayes_pls_golite062009 |
| glucosidase activity | 0.528679164808812 | bayes_pls_golite062009 |
| hexosaminidase activity | 0.423006654245821 | bayes_pls_golite062009 |
| receptor binding | 0.131188274937943 | bayes_pls_golite062009 |
| alpha-galactosidase activity | 0.113591899485521 | bayes_pls_golite062009 |
| carbohydrate binding | 0.102788238231918 | bayes_pls_golite062009 |
|
Region A: Residues: [547-607] |
1 11 21 31 41 51
| | | | | |
1 TSQAHNGKCS TGPYQQSSDP CAIPMYHATT VPFVFAEYLT WSQQDNYLDF EGAEINQGTH 60
61 D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [608-713] |
1 11 21 31 41 51
| | | | | |
1 GAAAFGTPLA YSTNDKTAIE YQPYNKYGPG YWIAVLRMDC SKAEQGWFEV KGYETPDIGW 60
61 EGDIKQGSCS GSVGGSAPFS SINHVAKCGA VNVFTWGSAS CVIDSA
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 1ac0A |
| Description: | GLUCOAMYLASE, GRANULAR STARCH-BINDING DOMAIN COMPLEX WITH CYCLODEXTRIN, NMR, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
