| Protein: | CE08506 |
| Organism: | Caenorhabditis elegans |
| Length: | 591 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08506.
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..128] | [591..1859] |
|
Region A: Residues: [1-141] |
1 11 21 31 41 51
| | | | | |
1 MNRNKNNKKG RQAQLVQVAQ RTVNSTITGK PLSTFHEVIL HQLSMVGYHR VRYFSLSGYD 60
61 MIVGGIAWAV SILVPEPNGH PWKFRESLPD DKKKTASEKR SEIAQIIYAL QKINCPFDAT 120
121 EQEFLNVDSS VLVDIITWVL Q
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [142-512] |
1 11 21 31 41 51
| | | | | |
1 RISRQTMDMD RFKCFMACFN MKYEDEAAAA LDFISSLRRP NANQYTESAR IKLFDNAILR 60
61 DMKADSRIII AEYLQYGQTG VKKYPSFVPS DEEGRHKTGL SEISEAQYEK QRQDLKKLSN 120
121 KIYSASSDTT KQFADKLFSA IDNLHLAENI IELEQRFKEE AALYYAMYAR FSELEAQLSA 180
181 ATKYTSFLTS FEVERITDVV ATTISRASMF HTDFSQELEL AVEVEKTLAA NKDQNGAFKK 240
241 YCPFRREKLE NHRKERLILQ KKAQIAQSIE QAVRKAFEEY IEVRQKREQG SMADNIDDDP 300
301 FSMLNEIDHT IASDINEILS TVNKMIGHVN SMPQPKERTE YDYRVAYIGY TSDACMFLSD 360
361 WLGKAKFLKD Q
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [513-591] |
1 11 21 31 41 51
| | | | | |
1 RRNLCERNLR LSFDTKKMCH LVKCASRENA KYHALSDLLF QKRKYMSTWE QDLFKKAGAG 60
61 NNSSELPKSW ELDYAAFKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
