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Protein Overview: CE08506

General Information:
Name(s) found: CE08506 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00007847 status:Confirmed UniProt:Q93314 protein_id:CAB01731.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRNKNNKKG RQAQLVQVAQ RTVNSTITGK PLSTFHEVIL HQLSMVGYHR VRYFSLSGYD  60
   61 MIVGGIAWAV SILVPEPNGH PWKFRESLPD DKKKTASEKR SEIAQIIYAL QKINCPFDAT 120
  121 EQEFLNVDSS VLVDIITWVL QRISRQTMDM DRFKCFMACF NMKYEDEAAA ALDFISSLRR 180
  181 PNANQYTESA RIKLFDNAIL RDMKADSRII IAEYLQYGQT GVKKYPSFVP SDEEGRHKTG 240
  241 LSEISEAQYE KQRQDLKKLS NKIYSASSDT TKQFADKLFS AIDNLHLAEN IIELEQRFKE 300
  301 EAALYYAMYA RFSELEAQLS AATKYTSFLT SFEVERITDV VATTISRASM FHTDFSQELE 360
  361 LAVEVEKTLA ANKDQNGAFK KYCPFRREKL ENHRKERLIL QKKAQIAQSI EQAVRKAFEE 420
  421 YIEVRQKREQ GSMADNIDDD PFSMLNEIDH TIASDINEIL STVNKMIGHV NSMPQPKERT 480
  481 EYDYRVAYIG YTSDACMFLS DWLGKAKFLK DQRRNLCERN LRLSFDTKKM CHLVKCASRE 540
  541 NAKYHALSDL LFQKRKYMST WEQDLFKKAG AGNNSSELPK SWELDYAAFK K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] deduced N/A No confident structure predictions are available.
    2 View Details [142..512] PSI-BLAST 16.522879 Heavy meromyosin subfragment
    3 View Details [513..591] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle