| Protein: | CE08369 |
| Organism: | Caenorhabditis elegans |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08369.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..5] | [454..345] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MNRNRRDGPQ RDVKRERRSR SRSPRRSRIG AAVGSNNGNS SSNNRMVFIT NIAYEARWVD 60
61 LKSLVREKGG EVAFCELLED RNGKPKGNAV VEFETREGAE KCVENLQKFD WKGRTIIAKE 120
121 IRDPNAFFRT IKTETGIDYL SRTGGGGAGG RGPPPKDLDR PTRTGTYDLF GLNMEFLRQH 180
181 NIEP
|
| Detection Method: |  |
| Confidence: | 30.09691 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [185-454] |
1 11 21 31 41 51
| | | | | |
1 PLCERIFIAN LAFNVGTDKL YEVFGMAGKI TWMDFRIDKE GKSKGVCVIQ YTHPIEAVQA 60
61 VSMLNGQRLF DRNLVVKMDR FDKELEHKEG GLPRGLESIG MGLGAEGAPL SNVHGMFPGD 120
121 ASVPFTAPAA PFVGGPQVVS AGGFGGVVEQ ANFARSVMNN GPFGGNAGVG GAGGATFAQP 180
181 DVFGVNGAGG LAGAATPQAT RVIIIRNLPS DYTWQIVRDR VRNFGEVDSV DMMAPGAARI 240
241 RFATFQDAER ARAALYGSTV EGRMISVDYA
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2ghpA |
| Description: | No description for 2ghpA was found. |
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
