| Protein: | dsc-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dsc-1.
| Description | E-value | Query Range |
Subject Range |
|
|
147.0 | [0..7] | [248..1] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MNPHTNLNNV FDFPDLPMLL PKSEALSVTT DFSVPPVQQG AQQFHPPRNL GPQLARRWSC 60
61 GDSQHADEPP ASYYHNLGVA LHNHFQMSNQ HYLSDFDCPT TVSPISSAHE TGQLPQLSPY 120
121 DHIGNQDPHM FSPHAYGNSM IPDNSYFENA SRSISAPN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [159-310] |
1 11 21 31 41 51
| | | | | |
1 VGNSTLNPSL MSSDNAQSCG GRRRFRTNFT ELQSTFLEDS FKESHYPDHK AKKYMADFLK 60
61 IPEDRITVWF QNRRAKWRRK EHRQRDRTRN ESFSGGSNSF DFACFSAQHP DDGPNAKHPN 120
121 SFGIPNQPMS LDQFPMNTEQ DFPEFPSLQE HQ
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.20352928045795 | bayes_pls_golite062009 |
| transcription regulator activity | 0.835457558255133 | bayes_pls_golite062009 |
| DNA binding | 0.655670804261679 | bayes_pls_golite062009 |
| nucleic acid binding | 0.439599063396733 | bayes_pls_golite062009 |
| transcription factor activity | 0.345340917029646 | bayes_pls_golite062009 |
| protein binding | 0.0926151783365978 | bayes_pls_golite062009 |
