| Protein: | hil-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 225 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hil-5.
| Description | E-value | Query Range |
Subject Range |
|
|
141.0 | [0..31] | [223..427] |
|
|
137.0 | [0..31] | [223..426] |
|
|
135.0 | [0..31] | [222..432] |
|
|
134.0 | [0..31] | [222..321] |
|
Region A: Residues: [1-156] |
1 11 21 31 41 51
| | | | | |
1 MSDVAVAETP AVKTPTKASK ATKAKATKIP KVKVVAAHPP FINMITEAVS NLKDRKGSSR 60
61 VAIFKFITAK YTLGDQVNKT NAHLRSALKK GVVSKVLVQT NGIGANGRFR LAVAEKPPAV 120
121 KKAATGEQKV MKTVAKKAVS GDKAKKTVAK KTGDKV
|
| Detection Method: |  |
| Confidence: | 7.69897 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [157-225] |
1 11 21 31 41 51
| | | | | |
1 KKVKSPKRIA KPAVKKVTKK AAAPTKSAAN ETAPKKAAAT EAAPKKAAVT KAATKKTPAR 60
61 KAVGTAPKA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
