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View Structure Prediction Details

Protein: CE07539
Organism: Caenorhabditis elegans
Length: 537 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE07539.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
278.0 [0..74] [314..1]

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Predicted Domain #1
Region A:
Residues: [1-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGFNFELRF FFEIVNFQIE FFFSKKNCFF RTMSGSLQEV LKNCAPVLVV TICLYLAYNL  60
   61 LNKAIPGAHN LSKLNVKNKI VVITGASSGL GKSLAFELYK RGAQVILLAR STEKLKEICA 120
  121 ELTKTFPLNK NKPTYYFFDI TNPDKAPWAQ IPKVDVLINN AGMSNRGSCQ DTTMAIHRKA 180
  181 METNLFGHVQ VTQSLLSKLS PDGCIVVTSS IQGKVAIPYR GSYSASKHAL QGYFDCLRAE 240
  241 HKNLHILVVS AGYINTGFGS RALDTDGKVV GVEDENQKKG YSPEHSARMI SDAIRDRVSD 300
  301 FDMAPFGARF AIFLRYFWPT LLNYALY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 2hq1A
Description: No description for 2hq1A was found.

Predicted Domain #2
Region A:
Residues: [328-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRGTKDQWAP KNKKDCEFSG WITIALNGTS KTFCTFKFQE ITSIVQKRFV QIVFSFLLID  60
   61 SADMHLKGKL FSHHQHYHHD HHQEIEASIP L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 2ju1A
Description: No description for 2ju1A was found.

Predicted Domain #3
Region A:
Residues: [419-537]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLSRRTRKTA RRHLVSKEHF LNKVKIEAAL ERFNRDEVVY YQGGQRVLCE LTVTENRPCR  60
   61 LLIGRNKRSL LNYMQLELET GISDEQLVLT DMAGAEFPIS NLTIIIIPLT KAYNDGNER

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.09691
Match: 2hg4A
Description: No description for 2hg4A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle