| Protein: | twk-22 |
| Organism: | Caenorhabditis elegans |
| Length: | 757 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-22.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..48] | [751..38] |
|
Region A: Residues: [1-515] |
1 11 21 31 41 51
| | | | | |
1 MDVPTFILHS ADTESVISDD DSSYYFDGSV EQLTLRNQEY SDDNRMQRRA PIRRKSALDD 60
61 DQTSQAMKLL EKYIRKKYRH SVIFSQDSAD IEQSSTPVGH TQSACQFSRN LTPEQRNGFY 120
121 STPLGPAPSE YHFPPGSPQF RESTIREEFK QQYRETWGHW FVRVGKFLYK LLGIQYMLLA 180
181 LMILGYACLG GYIFLTLEYD QQQLDLEVEK QVRLSESTLL AENLLKYLKQ WNCGQSNENR 240
241 CLELITKAFI ERSIKVERDI RGEGWRYGNL ACKTNLGRVA TIIYGLIGIP LMLFVLKIFG 300
301 EHSIKWAQKV RYSIRRCVKR CFRRSKLKRA STIESVASDE MPCEESGISE DEEQITTFPV 360
361 KWALFIVFFF MVVCSLIVSF WEKWDFLTAF YFFFVSLSTI GFGDVIPEHP RTACGNGLLE 420
421 IKICYISVMI NGALKMSGDA VNFPRFLNTK IQLTEKFQLY LISALFVLYF VGLALFSMVY 480
481 AILQERVENQ YMWALELIDQ EYQENQKQDP DDHLE
|
| Detection Method: |  |
| Confidence: | 64.221849 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [516-576] |
1 11 21 31 41 51
| | | | | |
1 IPTILPENAA GMEGWTNTIG KMVSQNPVRW RAKNSAYSME NMPDRPISER RFSVLSPGEA 60
61 P
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1q3eA |
| Description: | HCN2J 443-645 in the presence of cGMP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-757] |
1 11 21 31 41 51
| | | | | |
1 QAPPPVLGTF MLHSLSVKKK LLARSESILN RTGSPWPHAA EMNRPKEATR LGEPSALRVS 60
61 APNLTISGGN RSPSGGALSV ITEASDEDTR HFKKHRRPLA KTVSTDGTVS NHGSAESLDQ 120
121 VMDELQLESH DQAVTPKPYR DPTTSTRFRK RDETVVSRAE KMPLSPNEVL EEEDEDENGD 180
181 T
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
