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View Structure Prediction Details

Protein: unc-7
Organism: Caenorhabditis elegans
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-7.

Description E-value Query
Range
Subject
Range
gi|157771924 - gi|157771924|ref|XP_001677782.1| Hypothetical protein CBG07625 [Caenorhabditis briggsae AF16]
gi|39596636, gi|... - gi|39596636|emb|CAE63255.1| Hypothetical protein CBG07625 [Caenorhabditis briggsae], gi|187033275|em...
722.0 [0..1] [522..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSSSNPEP PLLSRIIGVP PPPPPRAPTT ALVLRVPTVD SPSKKKQQPD TRNKYQETAL  60
   61 RDKKTRTPLE KARHLDNLPS YQAQKLLDGS HQLRIDSHHV GSAGHGAGQG HGHKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFGPAMILYY LASAFRALYP RLDDDFVDKL NYYYTTTILA SFALLVSAKQ YVGFPIQCWV  60
   61 PATFTDAMEQ YTENYCWVQN TYWVPMQEDI PREIYSRRNR QIGYYQWVPF ILAIEALLFY 120
  121 VPCILWRGLL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWHSGINLQG LVQMACDARL MDSEIKTRTV YTMARHMQDE VQLTNIDRQG HSRSCFSNLQ  60
   61 LGANCGRHCG CYVTMLYIGI KVLYSANVLL QFFLLNHLLG SNDLAYGFSL LKDLMHAIEW 120
  121 EQTGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [371-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPRVTLCDFE VRVLGNIHRH TVQCVLMINM FNEKIFLFLW FWFLTCGIVT VCNTMYWILI  60
   61 MFIPSQGMSF VRKYLRVLPD HPAKPIADDV TLRKFTNNFL RKDGVFMLRM ISTHAGELMS 120
  121 SELILALWQD FNNVDRSPTQ FWDAEHGQGT ID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle