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View Structure Prediction Details

Protein: unc-7
Organism: Caenorhabditis elegans
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-7.

Description E-value Query
Range
Subject
Range
gi|157771924 - gi|157771924|ref|XP_001677782.1| Hypothetical protein CBG07625 [Caenorhabditis briggsae AF16]
gi|39596636, gi|... - gi|39596636|emb|CAE63255.1| Hypothetical protein CBG07625 [Caenorhabditis briggsae], gi|187033275|em...
722.0 [0..1] [522..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSSSNPEP PLLSRIIGVP PPPPPRAPTT ALVLRVPTVD SPSKKKQQPD TRNKYQETAL  60
   61 RDKKTRTPLE KARHLDNLPS YQAQKLLDGS HQLRIDSHHV GSAGHGAGQG HGHKK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFGPAMILYY LASAFRALYP RLDDDFVDKL NYYYTTTILA SFALLVSAKQ YVGFPIQCWV  60
   61 PATFTDAMEQ YTENYCWVQN TYWVPMQEDI PREIYSRRNR QIGYYQWVPF ILAIEALLFY 120
  121 VPCILWRGLL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [246-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YWHSGINLQG LVQMACDARL MDSEIKTRTV YTMARHMQDE VQLTNIDRQG HSRSCFSNLQ  60
   61 LGANCGRHCG CYVTMLYIGI KVLYSANVLL QFFLLNHLLG SNDLAYGFSL LKDLMHAIEW 120
  121 EQTGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [371-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FPRVTLCDFE VRVLGNIHRH TVQCVLMINM FNEKIFLFLW FWFLTCGIVT VCNTMYWILI  60
   61 MFIPSQGMSF VRKYLRVLPD HPAKPIADDV TLRKFTNNFL RKDGVFMLRM ISTHAGELMS 120
  121 SELILALWQD FNNVDRSPTQ FWDAEHGQGT ID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle