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View Structure Prediction Details

Protein: sur-5
Organism: Caenorhabditis elegans
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sur-5.

Description E-value Query
Range
Subject
Range
gi|78044614, gi|... - gi|78044614|ref|YP_359514.1| acetyl-CoA synthetase [Carboxydothermus hydrogenoformans Z-2901], gi|77...
630.0 [0..33] [698..1]

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Predicted Domain #1
Region A:
Residues: [1-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAVSANGKT TEKHENGAHT NGTTNGTTNG SMNGNEISHV QKLQPVYYKP PQNLETFELS  60
   61 LRNHFEEKTN KKFADYREFH RFTCDNYGIF WEDLLKLSDV KLHQNYNQVI DHNLKINERP 120
  121 RWFNGATLNY TENVIERGTA TDIAVLNASI EETVTEYTYD NLRKDVYRIA TSLRNYGIGP 180
  181 GDTVCGFVPN TYDTLVAVFA TAAVGAAWCS ASVDFGPAGV LDRFRQVHPK VLFTVNHVTY 240
  241 KKKLIDQTDK INEIVKELPT LEKIVVSDTF TSVKFDATKY NQSDKFSSLE EFKTPIADVV 300
  301 LPFVYTPVPF SDPLFVMFSS GTTGIPKAMV HTVGGTLLKH IEEHLVQGDS KKHDRMFFYT 360
  361 TCGWMMYNWM ISFLYSKGSV VLFDECPLAP DTHIIMKIAA KTQSTMIGMG AKLYDEYLRL 420
  421 QIPFNTLYDL SKIHTVYSTG SPLKKECFAY INTYIAPGAL IASISGGTDI IGCFVGGIKS 480
  481 LSITPGECQC LFLGMDIKSF NYMDEEIINS DEQGELVCVT PFPSMPSHFL NDTDGKKYRD 540
  541 AYFARLEPFW AHGDFVRVNH STGGVEMLGR SDATLNRGGV RIGTAEIYSV VEKIPHIADC 600
  601 IVAGRLVEEG MDEEVLLFVK MVPGQELTHS IQAAIVSKLR NDMSPRHVPN KIYAVDDIPY 660
  661 TSSGKKVEVA VKQIVSGKAV QKASSIRNPE SLDHFVQYRL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 171.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle